STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl18Mitochondrial ribosomal protein L18. (199 aa)    
Predicted Functional Partners:
W5M1B9_LEPOC
Mitochondrial ribosomal protein L40.
   
   0.974
mrpl44
Mitochondrial ribosomal protein L44.
   
 
 0.967
mrpl4
Mitochondrial ribosomal protein L4.
   
   0.960
mrps25
Mitochondrial ribosomal protein S25.
   
 
 0.958
W5MEN5_LEPOC
Mitochondrial ribosomal protein L15.
   
 
 0.957
mrpl35
Mitochondrial ribosomal protein L35.
   
   0.951
MRPL58
Mitochondrial ribosomal protein L58.
   
   0.951
mrps10
Mitochondrial ribosomal protein S10.
   
 
 0.949
mrpl13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.948
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.947
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.