STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem144Transmembrane protein 144a. (400 aa)    
Predicted Functional Partners:
glrb
Glycine receptor, beta a; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.625
gria2
Glutamate receptor, ionotropic, AMPA 2b.
      
 0.590
slc35c2
Solute carrier family 35 member C2.
      
 0.560
lzic
Leucine zipper and CTNNBIP1 domain containing.
      
 0.526
slc35b3
Solute carrier family 35 member B3.
      
 0.526
kti12
KTI12 chromatin associated homolog.
      
 0.514
slc35c1
Solute carrier family 35 member C1.
      
 0.510
kctd9
Potassium channel tetramerization domain containing 9b.
      
 0.428
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
      
 0.400
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.