STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txnipThioredoxin interacting protein b. (397 aa)    
Predicted Functional Partners:
W5N793_LEPOC
Thioredoxin; Belongs to the thioredoxin family.
    
 0.994
txn2
Thioredoxin 2.
    
 0.950
itch
E3 ubiquitin-protein ligase.
    
 
 0.931
W5LVP7_LEPOC
NACHT domain-containing protein.
    
 0.767
W5LW95_LEPOC
NACHT domain-containing protein.
    
 0.767
W5LX17_LEPOC
Si:dkeyp-80d11.12.
    
 0.767
W5M1V7_LEPOC
NACHT domain-containing protein.
    
 0.767
W5MKJ4_LEPOC
Protein tyrosine phosphatase non-receptor type 11b.
    
   0.741
W5MLN9_LEPOC
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
   0.741
W5MLP2_LEPOC
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
   0.741
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.