STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctsoCathepsin O; Belongs to the peptidase C1 family. (355 aa)    
Predicted Functional Partners:
ctsb
Cathepsin Ba; Belongs to the peptidase C1 family.
  
0.877
W5MJU5_LEPOC
Cathepsin C; Belongs to the peptidase C1 family.
   
0.876
ctsh
Cathepsin H; Belongs to the peptidase C1 family.
  
0.836
ctsz
Cathepsin Z; Belongs to the peptidase C1 family.
   
0.832
W5MDE2_LEPOC
Cathepsin L.1; Belongs to the peptidase C1 family.
  
0.671
IFITM3
Uncharacterized protein.
   
 0.662
ctsd
Cathepsin D; Belongs to the peptidase A1 family.
   
 0.662
LOC102697123
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.662
LOC102685307
Pepsinogen 4, group I (pepsinogen A); Belongs to the peptidase A1 family.
   
 0.662
LOC102685508
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.662
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.