sf3a1 protein (Lepisosteus oculatus) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

sf3a1

Splicing factor 3a, subunit 1. (791 aa)

Predicted Functional Partners:

sf3a3

0.999

sf3a2

0.999

LOC107076440

0.998

snrpa1

0.998

sf3b1

0.997

sf3b3

0.997

sf3b4

0.997

W5MVP0_LEPOC

0.997

sf3b5

0.996

snrpd1

0.993

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107076440	W5MVP0_LEPOC	ENSLOCP00000000090	ENSLOCP00000012449	PSP domain-containing protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	0.990
LOC107076440	sf3a1	ENSLOCP00000000090	ENSLOCP00000010014	PSP domain-containing protein.	Splicing factor 3a, subunit 1.	0.998
LOC107076440	sf3a2	ENSLOCP00000000090	ENSLOCP00000007045	PSP domain-containing protein.	Splicing factor 3a, subunit 2.	0.998
LOC107076440	sf3a3	ENSLOCP00000000090	ENSLOCP00000003875	PSP domain-containing protein.	Splicing factor 3a, subunit 3.	0.997
LOC107076440	sf3b1	ENSLOCP00000000090	ENSLOCP00000004663	PSP domain-containing protein.	Splicing factor 3b, subunit 1.	0.999
LOC107076440	sf3b3	ENSLOCP00000000090	ENSLOCP00000009184	PSP domain-containing protein.	Splicing factor 3b, subunit 3.	0.999
LOC107076440	sf3b4	ENSLOCP00000000090	ENSLOCP00000011024	PSP domain-containing protein.	Splicing factor 3b, subunit 4.	0.999
LOC107076440	sf3b5	ENSLOCP00000000090	ENSLOCP00000021457	PSP domain-containing protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.999
LOC107076440	snrpa1	ENSLOCP00000000090	ENSLOCP00000017355	PSP domain-containing protein.	Small nuclear ribonucleoprotein polypeptide A.	0.998
LOC107076440	snrpd1	ENSLOCP00000000090	ENSLOCP00000002311	PSP domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.997
W5MVP0_LEPOC	LOC107076440	ENSLOCP00000012449	ENSLOCP00000000090	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	PSP domain-containing protein.	0.990
W5MVP0_LEPOC	sf3a1	ENSLOCP00000012449	ENSLOCP00000010014	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	Splicing factor 3a, subunit 1.	0.997
W5MVP0_LEPOC	sf3a2	ENSLOCP00000012449	ENSLOCP00000007045	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	Splicing factor 3a, subunit 2.	0.996
W5MVP0_LEPOC	sf3a3	ENSLOCP00000012449	ENSLOCP00000003875	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	Splicing factor 3a, subunit 3.	0.997
W5MVP0_LEPOC	sf3b1	ENSLOCP00000012449	ENSLOCP00000004663	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	Splicing factor 3b, subunit 1.	0.997
W5MVP0_LEPOC	sf3b3	ENSLOCP00000012449	ENSLOCP00000009184	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	Splicing factor 3b, subunit 3.	0.995
W5MVP0_LEPOC	sf3b4	ENSLOCP00000012449	ENSLOCP00000011024	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	Splicing factor 3b, subunit 4.	0.986
W5MVP0_LEPOC	sf3b5	ENSLOCP00000012449	ENSLOCP00000021457	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.996
W5MVP0_LEPOC	snrpa1	ENSLOCP00000012449	ENSLOCP00000017355	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	Small nuclear ribonucleoprotein polypeptide A.	0.998
W5MVP0_LEPOC	snrpd1	ENSLOCP00000012449	ENSLOCP00000002311	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.994