STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MNT4_LEPOCReceptor protein-tyrosine kinase. (870 aa)    
Predicted Functional Partners:
efnb1
Ephrin-B1; Belongs to the ephrin family.
   
 0.782
itsn2
Intersectin 2b.
   
 0.759
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.685
efnb3
Ephrin-B3a; Belongs to the ephrin family.
   
 0.660
efnb2
Ephrin-B2a; Belongs to the ephrin family.
   
 0.655
LOC107077872
Uncharacterized protein.
    
 0.615
LOC102690405
Ras-related GTP binding A.
    
 0.593
LOC102685777
Ephrin-A3b; Belongs to the ephrin family.
   
 0.592
myo9b
Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
  0.586
myo9a
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
  0.586
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.