STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102695053AMP-binding domain-containing protein. (628 aa)    
Predicted Functional Partners:
scp2
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.894
W5M3R4_LEPOC
Bardet-Biedl syndrome 1.
   
 0.881
bbs9
Bardet-Biedl syndrome 9.
   
 0.880
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.879
W5MWM9_LEPOC
Tetratricopeptide repeat domain 8.
    
 0.861
W5NCP5_LEPOC
Bardet-Biedl syndrome 4.
   
 0.860
amacr
Alpha-methylacyl-CoA racemase.
   
 
 0.672
slc27a1
Solute carrier family 27 member 1a.
  
  
0.667
acot8
Acyl-CoA thioesterase 8.
     
 0.665
lztfl1
Leucine zipper transcription factor-like 1.
    
 0.658
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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