Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cyth3Cytohesin 1a. (400 aa)    
Predicted Functional Partners:
arf6
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 0.992
LOC102692357
Cytohesin 4a.
  
 
 
0.954
cyth1
Cytohesin 1b.
  
  
 
0.900
cytip
Cytohesin 1 interacting protein.
   
 
 0.882
W5NBR3_LEPOC
Si:ch211-169p10.1.
    
 
 0.829
inava
Innate immunity activator a.
    
 
 0.822
cnksr1
Connector enhancer of kinase suppressor of Ras 1.
    
 
 0.809
frmd4b
FERM domain containing 4Bb.
    
 
 0.747
frmd4a
FERM domain containing 4A.
    
 
 0.747
LOC102699081
Si:rp71-17i16.5; Belongs to the PI3/PI4-kinase family.
   
  0.682
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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