STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilf3Interleukin enhancer binding factor 3b. (1013 aa)    
Predicted Functional Partners:
W5MIW5_LEPOC
Interleukin enhancer binding factor 2.
   
 
0.989
W5M2C1_LEPOC
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.881
W5NG38_LEPOC
Uncharacterized protein.
    
 
 0.876
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.845
hnrnpc
Heterogeneous nuclear ribonucleoprotein C.
   
 
 0.837
hnrnpk
Heterogeneous nuclear ribonucleoprotein K, like.
   
 
 0.801
tardbp
TAR DNA binding protein, like.
   
 
 0.714
srsf3
Serine and arginine rich splicing factor 3a.
   
 
 0.698
W5N880_LEPOC
Serrate RNA effector molecule homolog (Arabidopsis).
   
  
 0.692
W5N908_LEPOC
Aly/REF export factor.
   
  
 0.675
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.