STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfxapRegulatory factor X-associated protein. (180 aa)    
Predicted Functional Partners:
W5MBF3_LEPOC
Regulatory factor X-associated ankyrin-containing protein.
    
 0.996
W5MPJ7_LEPOC
Regulatory factor X, 5.
    
 0.995
W5MG99_LEPOC
NACHT domain-containing protein.
     
 0.937
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.935
rfx7
Regulatory factor X7a.
    
 0.856
tonsl
Tonsoku-like, DNA repair protein.
    
 0.841
rfx4
Regulatory factor X, 4.
    
 0.819
rfx2
Regulatory factor X, 2 (influences HLA class II expression).
    
 0.812
W5MGH6_LEPOC
Regulatory factor X, 1b (influences HLA class II expression).
    
 0.812
W5N5S0_LEPOC
Regulatory factor X, 3 (influences HLA class II expression).
    
 0.812
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.