STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MPJ7_LEPOCRegulatory factor X, 5. (258 aa)    
Predicted Functional Partners:
W5MBF3_LEPOC
Regulatory factor X-associated ankyrin-containing protein.
    
 0.995
rfxap
Regulatory factor X-associated protein.
    
 0.995
W5MG99_LEPOC
NACHT domain-containing protein.
    
 0.980
chek2
Checkpoint kinase 2.
   
 0.836
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.786
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.705
W5MM37_LEPOC
NACHT domain-containing protein.
    
 0.619
tonsl
Tonsoku-like, DNA repair protein.
    
  0.617
dclk1
Doublecortin-like kinase 1a.
     
 0.583
W5LVB6_LEPOC
NACHT domain-containing protein.
    
 0.551
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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