STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MPP1_LEPOCGlutaredoxin 5 homolog (S. cerevisiae). (145 aa)    
Predicted Functional Partners:
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
    
 
 0.899
isca1
Iron-sulfur cluster assembly 1.
   
 
 0.822
isca2
Iron-sulfur cluster assembly 2.
    
 0.820
mst1r
Macrophage stimulating 1 receptor b.
    
  0.751
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.751
hscb
Si:ch211-207k7.4.
    
 0.669
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
 
 0.651
W5MPW4_LEPOC
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.647
W5MHQ3_LEPOC
NFS1 cysteine desulfurase.
    
 
 0.595
prkrip1
PRKR interacting protein 1.
      
 0.581
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.