STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MPQ9_LEPOCSpectrin repeat containing, nuclear envelope family member 3. (995 aa)    
Predicted Functional Partners:
sun1
Sad1 and UNC84 domain containing 1.
    
 0.909
W5LYM1_LEPOC
Si:dkey-92f12.2.
    
 0.857
W5N082_LEPOC
SUN domain-containing protein.
    
 0.857
LOC107078862
Uncharacterized protein.
    
 0.802
W5M8B8_LEPOC
Uncharacterized protein.
    
 0.703
W5NHH6_LEPOC
Spectrin repeat containing, nuclear envelope 1b.
    
0.607
LOC107079122
KASH_CCD domain-containing protein.
     
  0.540
mst1r
Macrophage stimulating 1 receptor b.
    
  0.528
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.528
ptk7
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.522
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (12%) [HD]