STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MPX6_LEPOCCylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family. (763 aa)    
Predicted Functional Partners:
W5MIV7_LEPOC
Death domain-containing protein.
    
 0.961
W5N5X9_LEPOC
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.960
rps27a
Ribosomal protein S27a.
    
  0.927
W5LYQ5_LEPOC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.921
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.920
W5N321_LEPOC
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.910
W5M9X3_LEPOC
ANK_REP_REGION domain-containing protein.
    
 0.894
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.885
CASP8
Caspase 8; Belongs to the peptidase C14A family.
    
 0.885
W5MXT6_LEPOC
Caspase 8; Belongs to the peptidase C14A family.
    
 0.885
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.