STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbr1T-box brain transcription factor 1a. (677 aa)    
Predicted Functional Partners:
egr3
Early growth response 3.
   
 
 0.652
W5MF89_LEPOC
Pleiomorphic adenoma gene-like 2.
    
 
 0.589
panx2
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.578
LOC102690128
T-box transcription factor Ta.
   
 
0.561
LOC102691618
Forkhead box H1.
     
 0.561
W5MX61_LEPOC
T-box transcription factor 19.
   
 
0.561
W5NIF4_LEPOC
T-box transcription factor Tb.
   
 
0.561
W5N731_LEPOC
T-box transcription factor 21.
   
 
 
0.554
SNAI2
Snail family transcriptional repressor 2.
    
 0.552
zic1
Zic family member 1 (odd-paired homolog, Drosophila).
    
 
 0.528
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.