STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pla2r1Phospholipase A2 receptor 1. (1488 aa)    
Predicted Functional Partners:
W5MQ64_LEPOC
C-type lectin domain-containing protein.
    
 0.751
W5M923_LEPOC
F5/8 type C domain-containing protein.
 
   
  0.695
TNN
Tenascin N.
   
  0.576
W5LXI5_LEPOC
Ig-like domain-containing protein.
    
 0.566
W5M845_LEPOC
Uncharacterized protein.
    
 0.543
hapln1
Hyaluronan and proteoglycan link protein 1b.
    
  0.510
W5LZU4_LEPOC
Tenascin C.
    
  0.509
tnr
Tenascin R (restrictin, janusin).
    
  0.509
W5MKJ4_LEPOC
Protein tyrosine phosphatase non-receptor type 11b.
   
  0.500
W5MLN9_LEPOC
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.500
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.