STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tecpr1Tectonin beta-propeller repeat containing 1a. (1170 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1a.
    
 0.825
W5MW59_LEPOC
Uncharacterized protein.
    
 0.647
W5MW67_LEPOC
RING-type domain-containing protein.
    
 0.647
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.627
W5MSM4_LEPOC
Protein kinase domain-containing protein.
    
  0.627
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
     
 0.616
cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
  0.602
map2k2
Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.
    
 0.550
LOC102690085
IGv domain-containing protein.
    
 0.550
map2k1
Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
    
 0.550
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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