STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfip2ADP-ribosylation factor interacting protein 2b. (355 aa)    
Predicted Functional Partners:
W5NDJ0_LEPOC
ADP-ribosylation factor-like 1.
    
 0.931
arf6
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 0.778
rac1
Rac family small GTPase 1b.
   
 0.725
RAC3
Rac family small GTPase 3.
   
 0.725
W5MJ94_LEPOC
ADP-ribosylation factor-like 15b.
    
 0.630
rab2a
RAB2A, member RAS oncogene family.
   
 0.554
LOC102690743
Ras homolog gene family, member Gc.
   
 0.549
rhog
Ras homolog family member Gb.
   
 0.549
LOC102698253
Cell division cycle 42, like.
   
 0.528
cdc42
Cell division cycle 42.
   
 0.527
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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