STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102697516Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (810 aa)    
Predicted Functional Partners:
msn
Moesin a.
    
 0.820
LOC102684981
Calcineurin-like EF-hand protein 2.
   
 0.813
ezr
Ezrin a.
    
 0.796
ppp3r1
Protein phosphatase 3, regulatory subunit B, alpha a.
   
 0.764
W5M785_LEPOC
Tescalcin b.
   
 0.689
LOC102698311
Neurofibromin 2b (merlin).
    
 0.643
W5LZK3_LEPOC
Link domain-containing protein.
     
 0.601
W5M1U6_LEPOC
Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.595
W5NIY2_LEPOC
Rho-associated, coiled-coil containing protein kinase 2b; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.595
W5LV97_LEPOC
Mitogen-activated protein kinase 7.
    
  0.588
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.