STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dclk2Doublecortin-like kinase 2a. (794 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
    
 0.645
CALM1
Calmodulin 1; Belongs to the calmodulin family.
   
 0.626
calm1
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.626
CALM2
Calmodulin 2; Belongs to the calmodulin family.
   
 0.626
CALML6
Calmodulin like 6.
   
 0.591
W5N977_LEPOC
Calmodulin-like 4b.
   
 0.591
W5MZ31_LEPOC
Activating transcription factor 4b.
   
 0.563
cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
   
 
0.548
LOC102691822
Uncharacterized protein.
   
  0.546
ripk4
Receptor-interacting serine-threonine kinase 4.
    
0.530
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.