STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem182Transmembrane protein 182b. (246 aa)    
Predicted Functional Partners:
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.554
SHISAL2B
Shisa like 2B.
      
 0.491
W5NGA7_LEPOC
Tetraspanin 33a; Belongs to the tetraspanin (TM4SF) family.
      
 0.447
tm6sf2
Zgc:85843.
      
 0.406
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.406
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.405
hspb7
Heat shock protein family, member 7 (cardiovascular); Belongs to the small heat shock protein (HSP20) family.
   
  
 0.402
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.