STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aoc1Amine oxidase. (746 aa)    
Predicted Functional Partners:
W5M1I6_LEPOC
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
    
 0.892
W5M1R1_LEPOC
Amine oxidase.
  
 
 0.886
LOC102691383
Amine oxidase.
  
 
 0.886
W5MMM6_LEPOC
Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family.
   
 0.883
W5MDJ9_LEPOC
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.879
aldh9a1
Aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1; Belongs to the aldehyde dehydrogenase family.
   
 0.878
aldh7a1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
   
 0.878
adhfe1
Alcohol dehydrogenase iron containing 1.
     
 0.871
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
     
 0.869
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.868
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.