STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MQI3_LEPOCUncharacterized protein. (592 aa)    
Predicted Functional Partners:
W5MG35_LEPOC
Uncharacterized protein.
   
 0.986
W5MXK0_LEPOC
Uncharacterized protein.
   
 
 0.609
SIGIRR
Single Ig and TIR domain containing.
   
 
0.544
LOC107079496
Uncharacterized protein.
   
 
0.541
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 
 0.507
IL1RAP
Interleukin 1 receptor accessory protein.
    
0.483
LOC102696298
Histone H3; Belongs to the histone H3 family.
   
 
  0.408
LOC102684155
Histone H3; Belongs to the histone H3 family.
   
 
  0.408
LOC102694570
Selenoprotein H.
   
 
  0.408
W5MA18_LEPOC
Histone domain-containing protein.
   
 
  0.408
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.