STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107078226Si:ch73-174h16.5. (1348 aa)    
Predicted Functional Partners:
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.915
LOC102698835
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.878
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.877
PYROXD2
Pyridine nucleotide-disulphide oxidoreductase domain 2.
  
 
 0.854
W5N0Q7_LEPOC
Retinol saturase (all-trans-retinol 13,14-reductase).
  
 
 0.854
W5N617_LEPOC
Amino_oxidase domain-containing protein.
  
 
 0.854
W5N6B4_LEPOC
Uncharacterized protein.
  
 
 0.854
r3hdm4
R3H domain containing 4.
   
 
 0.844
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 
 0.844
ndufaf5
NADH:ubiquinone oxidoreductase complex assembly factor 5.
   
 0.834
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.