STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC29Tetratricopeptide repeat domain 29. (451 aa)    
Predicted Functional Partners:
W5N901_LEPOC
Coiled-coil domain containing 40.
   
 
 0.719
GNAZ
G protein subunit alpha z.
   
 0.652
gna12
Guanine nucleotide binding protein (G protein) alpha 12a.
   
 0.652
LOC102688115
Zgc:113333.
   
 0.652
GNAO1
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.
   
 0.652
gnai2
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.
   
 0.652
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.652
hexd
Hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing.
   
 0.652
LOC102690587
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
   
 0.652
W5N3J1_LEPOC
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.652
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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