Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
W5LWF4_LEPOC | adamts16 | ENSLOCP00000000461 | ENSLOCP00000010729 | Beta 3-glucosyltransferase a. | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | 0.610 |
W5LWF4_LEPOC | pofut2 | ENSLOCP00000000461 | ENSLOCP00000005270 | Beta 3-glucosyltransferase a. | Protein O-fucosyltransferase 2. | 0.585 |
W5M227_LEPOC | adamts16 | ENSLOCP00000002435 | ENSLOCP00000010729 | Usher syndrome 1C. | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | 0.430 |
W5M227_LEPOC | gpr84 | ENSLOCP00000002435 | ENSLOCP00000008702 | Usher syndrome 1C. | G protein-coupled receptor 84. | 0.594 |
W5M227_LEPOC | irx3 | ENSLOCP00000002435 | ENSLOCP00000008626 | Usher syndrome 1C. | Iroquois homeobox 3a. | 0.587 |
W5M227_LEPOC | sall4 | ENSLOCP00000002435 | ENSLOCP00000002852 | Usher syndrome 1C. | Spalt-like transcription factor 4. | 0.579 |
adamts16 | W5LWF4_LEPOC | ENSLOCP00000010729 | ENSLOCP00000000461 | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | Beta 3-glucosyltransferase a. | 0.610 |
adamts16 | W5M227_LEPOC | ENSLOCP00000010729 | ENSLOCP00000002435 | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | Usher syndrome 1C. | 0.430 |
adamts16 | gpr84 | ENSLOCP00000010729 | ENSLOCP00000008702 | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | G protein-coupled receptor 84. | 0.430 |
adamts16 | irx3 | ENSLOCP00000010729 | ENSLOCP00000008626 | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | Iroquois homeobox 3a. | 0.424 |
adamts16 | pofut2 | ENSLOCP00000010729 | ENSLOCP00000005270 | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | Protein O-fucosyltransferase 2. | 0.507 |
adamts16 | sall4 | ENSLOCP00000010729 | ENSLOCP00000002852 | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | Spalt-like transcription factor 4. | 0.491 |
gpr84 | W5M227_LEPOC | ENSLOCP00000008702 | ENSLOCP00000002435 | G protein-coupled receptor 84. | Usher syndrome 1C. | 0.594 |
gpr84 | adamts16 | ENSLOCP00000008702 | ENSLOCP00000010729 | G protein-coupled receptor 84. | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | 0.430 |
gpr84 | irx3 | ENSLOCP00000008702 | ENSLOCP00000008626 | G protein-coupled receptor 84. | Iroquois homeobox 3a. | 0.554 |
gpr84 | sall4 | ENSLOCP00000008702 | ENSLOCP00000002852 | G protein-coupled receptor 84. | Spalt-like transcription factor 4. | 0.546 |
irx3 | W5M227_LEPOC | ENSLOCP00000008626 | ENSLOCP00000002435 | Iroquois homeobox 3a. | Usher syndrome 1C. | 0.587 |
irx3 | adamts16 | ENSLOCP00000008626 | ENSLOCP00000010729 | Iroquois homeobox 3a. | ADAM metallopeptidase with thrombospondin type 1 motif, 16. | 0.424 |
irx3 | gpr84 | ENSLOCP00000008626 | ENSLOCP00000008702 | Iroquois homeobox 3a. | G protein-coupled receptor 84. | 0.554 |
irx3 | sall4 | ENSLOCP00000008626 | ENSLOCP00000002852 | Iroquois homeobox 3a. | Spalt-like transcription factor 4. | 0.582 |
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