STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c8bComplement component 8, beta polypeptide. (593 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
   
 0.986
c9
Complement component 9.
   
 
0.956
C8A
Complement C8 alpha chain.
  
 
0.938
W5MMN5_LEPOC
Complement component 6.
   
 
 
0.931
c7
Complement component 7b.
     
 
0.929
c8g
Complement C8 gamma chain; Belongs to the calycin superfamily. Lipocalin family.
   
 0.914
C5
Complement C5.
   
 0.893
itsn1
Intersectin 1 (SH3 domain protein).
   
 0.774
myo6
Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.772
W5MEF7_LEPOC
Uncharacterized protein.
   
 0.679
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.