STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybeyYbeY metalloendoribonuclease. (168 aa)    
Predicted Functional Partners:
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.968
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.942
W5MIR9_LEPOC
Si:dkey-159f12.2.
   
 
 0.942
mrpl21
Mitochondrial ribosomal protein L21.
  
 
 0.939
eral1
Era-like 12S mitochondrial rRNA chaperone 1.
  
  
 0.935
W5MH32_LEPOC
Death associated protein 3.
    
   0.933
mrpl47
Mitochondrial ribosomal protein L47.
    
   0.923
mrpl43
Mitochondrial ribosomal protein L43.
    
   0.923
W5NB71_LEPOC
MRP-L46 domain-containing protein.
    
   0.923
LACTB2
Lactamase beta 2.
   
 
 0.915
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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