STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sharpinSharpin and rbck1 related. (707 aa)    
Predicted Functional Partners:
W5LWL6_LEPOC
Uncharacterized protein.
   
 0.984
W5N311_LEPOC
Si:dkey-181m9.8.
   
 0.984
W5MIV7_LEPOC
Death domain-containing protein.
    
 0.969
W5LYW5_LEPOC
PUB domain-containing protein.
   
 0.954
W5MI33_LEPOC
RanBP-type and C3HC4-type zinc finger containing 1.
  
  
 
0.933
W5N5X9_LEPOC
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.911
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.890
LOC102695888
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.890
W5MWM5_LEPOC
Receptor-interacting serine-threonine kinase 2.
    
 0.882
otulin
OTU deubiquitinase with linear linkage specificity b.
    
 0.879
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.