STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MRZ0_LEPOCRal GTPase activating protein, alpha subunit 1 (catalytic). (2192 aa)    
Predicted Functional Partners:
ralgapb
Ral GTPase activating protein, beta subunit (non-catalytic).
   
0.798
fam91a1
Family with sequence similarity 91 member A1.
     
 0.644
rhoj
Ras homolog family member J.
    
  0.564
rhoq
Ras homolog family member Q.
    
  0.564
W5NN18_LEPOC
Ras homolog family member H.
    
  0.564
W5NFI2_LEPOC
Afadin, adherens junction formation factor a.
    
 0.540
LOC102690743
Ras homolog gene family, member Gc.
    
 0.532
rhog
Ras homolog family member Gb.
    
 0.532
RALB
V-ral simian leukemia viral oncogene homolog Ba (ras related).
    
 0.511
rala
V-ral simian leukemia viral oncogene homolog Aa (ras related).
    
 0.511
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.