STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MS16_LEPOCUncharacterized protein. (2308 aa)    
Predicted Functional Partners:
W5MRZ5_LEPOC
Uncharacterized protein.
 
    
0.920
W5M196_LEPOC
WD repeat domain 18.
   
 0.806
W5MDV3_LEPOC
Testis expressed 10.
   
 0.765
CALM1
Calmodulin 1; Belongs to the calmodulin family.
    
 0.714
calm1
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.714
CALM2
Calmodulin 2; Belongs to the calmodulin family.
    
 0.714
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.675
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.654
myl1
Myosin, light polypeptide 3, skeletal muscle.
   
 0.630
CALML6
Calmodulin like 6.
    
 0.593
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.