STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MS26_LEPOCPKS_ER domain-containing protein. (324 aa)    
Predicted Functional Partners:
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
    
 0.897
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.820
LOC102695896
Si:dkey-61p9.11.
 
 0.677
W5ML50_LEPOC
Carrier domain-containing protein.
 
 0.665
fasn
Coiled-coil domain containing 57.
  
0.665
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.657
adhfe1
Alcohol dehydrogenase iron containing 1.
    
 0.640
sord
Sorbitol dehydrogenase.
  
 
0.606
aasdh
Aminoadipate-semialdehyde dehydrogenase.
    
 0.601
atp5f1d
ATP synthase F1 subunit delta.
    
 0.597
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.