STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MS35_LEPOCAnkyrin repeat domain 45. (228 aa)    
Predicted Functional Partners:
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.990
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
  
 0.975
sil1
SIL1 nucleotide exchange factor.
   
 0.971
sec63
SEC63 homolog, protein translocation regulator.
  
 
 0.969
W5MEK3_LEPOC
Hypoxia up-regulated 1.
   
 
 0.952
W5MEP3_LEPOC
Uncharacterized protein.
   
 
 0.952
W5MEN1_LEPOC
Uncharacterized protein.
   
 0.944
ERN1
Endoplasmic reticulum to nucleus signaling 1.
   
 0.944
W5N075_LEPOC
BCL2 associated athanogene 3.
   
 0.928
ficd
FIC domain containing.
   
 
 0.903
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.