STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MSI0_LEPOCUncharacterized protein. (134 aa)    
Predicted Functional Partners:
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
     
 0.856
W5MFV4_LEPOC
Phosphatidylinositol glycan anchor biosynthesis, class S.
     
  0.849
pigu
Phosphatidylinositol glycan anchor biosynthesis, class U.
     
  0.842
pigt
Phosphatidylinositol glycan anchor biosynthesis, class T.
     
  0.837
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
     
  0.837
rps14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
     
 0.556
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
     
 0.556
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
     
 0.519
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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