STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dock8Dedicator of cytokinesis 8; Belongs to the DOCK family. (2100 aa)    
Predicted Functional Partners:
cdc42
Cell division cycle 42.
   
 0.889
LOC102698253
Cell division cycle 42, like.
   
 0.822
rac1
Rac family small GTPase 1b.
   
 0.673
RAC3
Rac family small GTPase 3.
   
 0.673
mst1r
Macrophage stimulating 1 receptor b.
   
 
  0.628
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.628
rhoq
Ras homolog family member Q.
   
 0.590
LOC102690743
Ras homolog gene family, member Gc.
   
 0.590
W5NN18_LEPOC
Ras homolog family member H.
   
 0.590
rhog
Ras homolog family member Gb.
   
 0.590
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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