STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iba57Iron-sulfur cluster assembly factor IBA57. (351 aa)    
Predicted Functional Partners:
gcsh
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
     
 0.919
W5MBX6_LEPOC
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.918
W5MG14_LEPOC
Serine hydroxymethyltransferase 2 (mitochondrial).
    
 0.918
dhfr
Dihydrofolate reductase.
  
 
 0.907
LOC102694946
Zgc:153031.
  
 
 0.906
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.896
mthfd2l
Uncharacterized protein.
     
 0.886
mthfd2
Uncharacterized protein.
     
 0.886
tyms
Thymidylate synthetase.
    
  0.874
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
     
 0.854
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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