STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hellsHelicase, lymphoid specific. (862 aa)    
Predicted Functional Partners:
LOC102699233
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.910
ak9
Adenylate kinase 9.
    
  0.886
W5NIU6_LEPOC
Exonuclease 1.
   
 0.874
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.854
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 
 0.850
W5N7Y2_LEPOC
Bromodomain PHD finger transcription factor.
   
 
 0.843
W5LY98_LEPOC
Bromodomain adjacent to zinc finger domain, 1B.
    
 0.829
baz2b
Bromodomain adjacent to zinc finger domain, 2Ba.
    
 0.829
W5MKB1_LEPOC
Bromodomain adjacent to zinc finger domain, 2A.
    
 0.829
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.829
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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