STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MTE4_LEPOCA kinase (PRKA) anchor protein 6. (2061 aa)    
Predicted Functional Partners:
rapgef3
Rap guanine nucleotide exchange factor (GEF) 3.
    
 
 0.631
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.614
akap1
A kinase (PRKA) anchor protein 1b.
      
 0.547
W5MGZ7_LEPOC
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
      
 0.463
W5MAP7_LEPOC
RUN and SH3 domain containing 2.
   
  
 0.450
dym
Dymeclin.
      
 0.424
RYR3
Ryanodine receptor 3.
   
 
 0.418
W5NAB3_LEPOC
Ryanodine receptor 1b (skeletal).
   
 
 0.418
W5NIQ4_LEPOC
Ryanodine receptor 2b (cardiac).
   
 
 0.418
W5M5D6_LEPOC
AKAP7_NLS domain-containing protein.
      
 0.406
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.