STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspa12aHeat shock protein 12A. (672 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
 0.993
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
  0.876
W5MIV1_LEPOC
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 0.849
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.847
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.809
W5N075_LEPOC
BCL2 associated athanogene 3.
   
 0.791
sil1
SIL1 nucleotide exchange factor.
   
 0.756
W5MSW2_LEPOC
GrpE-like 2, mitochondrial; Belongs to the GrpE family.
  
 
 0.753
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.742
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.737
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.