STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MTL4_LEPOCGDNF family receptor alpha 3. (405 aa)    
Predicted Functional Partners:
gdnf
Glial cell derived neurotrophic factor a.
    
 0.913
nrtn
Neurturin.
    
 0.796
ret
Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.
    
 0.777
LOC102695003
Uncharacterized protein.
    
 0.612
pdgfrl
Platelet-derived growth factor receptor-like.
    
 0.612
W5N2K8_LEPOC
Fibroblast growth factor receptor like 1b.
    
 0.598
W5MYE9_LEPOC
Fibroblast growth factor receptor like 1a.
    
 0.574
fgfr3
Fibroblast growth factor receptor.
    
 0.550
stil
STIL centriolar assembly protein.
    
 0.550
fgfr2
Fibroblast growth factor receptor.
    
 0.550
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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