STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MTQ1_LEPOCUncharacterized protein. (242 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.929
kmt5a
Lysine methyltransferase 5Ab.
   
 0.754
W5MJC8_LEPOC
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
   
 
 0.730
W5LVE4_LEPOC
SET domain-containing protein.
   
 0.725
ash1l
BAH domain-containing protein.
   
 0.725
W5MH53_LEPOC
SET and MYND domain containing 4.
   
 0.589
W5MF61_LEPOC
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
 0.565
W5NCA6_LEPOC
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
   
   0.544
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.529
meiob
Methionine sulfoxide reductase B1b.
   
 0.517
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.