STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102691027Polyamine oxidase (exo-N4-amino) 1. (497 aa)    
Predicted Functional Partners:
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.887
sms
Spermine synthase.
     
 0.880
W5N2Y0_LEPOC
Amine oxidase.
     
 0.865
smox
Spermine oxidase.
  
  
 
0.863
LOC102690282
Zgc:66484.
  
  
 
0.858
W5MMM6_LEPOC
Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family.
    
  0.847
W5MDJ9_LEPOC
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.843
aldh9a1
Aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1; Belongs to the aldehyde dehydrogenase family.
    
  0.822
LOC102682479
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.786
W5LXH2_LEPOC
Aldedh domain-containing protein.
     
 0.786
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.