STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MTZ4_LEPOCF-box and WD repeat domain containing 11. (304 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.973
cul1
Cullin 1a; Belongs to the cullin family.
    
 0.973
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.948
cul3
Cullin 3a; Belongs to the cullin family.
   
 0.933
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
    
 0.910
W5MTY5_LEPOC
F-box and WD repeat domain containing 11.
 
      0.900
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
  0.883
W5MU13_LEPOC
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 0.877
plk4
Polo-like kinase 4 (Drosophila).
    
 0.877
LOC102695806
Junction plakoglobin b.
    
 0.872
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.