STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cc2d2aCoiled-coil and C2 domain containing 2A. (1671 aa)    
Predicted Functional Partners:
W5MKH8_LEPOC
Tectonic family member 1.
    
 0.891
b9d2
B9 domain containing 2.
    
 0.882
b9d1
B9 protein domain 1.
    
 0.875
ahi1
Abelson helper integration site 1.
    
 0.868
W5LYF8_LEPOC
MKS transition zone complex subunit 1.
    
 0.863
tmem67
Transmembrane protein 67.
   
 
 0.852
LOC102687123
Uncharacterized protein.
     
 0.849
W5LXJ9_LEPOC
Uncharacterized protein.
   
 
 0.744
eef2kmt
Eukaryotic elongation factor 2 lysine methyltransferase.
    
 0.726
lyrm1
LYR motif containing 1; Belongs to the complex I LYR family.
    
 0.726
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.