STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam91a1Family with sequence similarity 91 member A1. (843 aa)    
Predicted Functional Partners:
clg10h17orf75
Zgc:153240.
    
 
 0.904
wdr11
WD repeat domain 11.
     
 0.776
chmp6
Charged multivesicular body protein 6b.
    
 
 0.691
W5MRZ0_LEPOC
Ral GTPase activating protein, alpha subunit 1 (catalytic).
     
 0.644
ralgapa2
Ral GTPase activating protein, alpha subunit 2 (catalytic).
     
 0.644
pak2
Non-specific serine/threonine protein kinase.
   
 
  0.611
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 
  0.588
pak6
Non-specific serine/threonine protein kinase.
   
 
  0.588
LOC102695806
Junction plakoglobin b.
   
 
  0.588
W5NAN1_LEPOC
Non-specific serine/threonine protein kinase.
   
 
  0.588
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.