STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wfs1Wolfram syndrome 1b (wolframin). (887 aa)    
Predicted Functional Partners:
atf6
Activating transcription factor 6.
    
 0.895
W5M5R8_LEPOC
X-box binding protein 1.
     
 0.685
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.661
fam20b
FAM20B glycosaminoglycan xylosylkinase.
     
 0.595
stox1
Storkhead box 1.
      
 0.577
srrm4
Serine/arginine repetitive matrix 4.
      
 0.570
adgrv1
Adhesion G protein-coupled receptor V1.
      
 0.563
samd7
Sterile alpha motif domain containing 7.
     
 0.561
atp1b1
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
    
 
 0.558
rpgrip1l
RPGRIP1 like.
      
 0.550
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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