STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rabifRAB interacting factor. (131 aa)    
Predicted Functional Partners:
W5M0R4_LEPOC
Uncharacterized protein.
    
 
 0.705
LOC102684782
Zgc:171927.
    
 
 0.705
rab1a
RAB1A, member RAS oncogene family a.
    
 
 0.705
W5LWL1_LEPOC
AIG1-type G domain-containing protein.
    
 
 0.694
W5LZP2_LEPOC
RAB, member RAS oncogene family-like 6b.
    
 
 0.694
LOC102697452
Zgc:101559.
    
 
 0.694
rab33b
RAB33B, member RAS oncogene family a.
    
 
 0.694
cgnl1
Cingulin-like 1.
    
 
 0.694
rab43
RAB43, member RAS oncogene family.
    
 
 0.694
LOC102698928
Si:dkey-13a21.4.
    
 
 0.694
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.