STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107078822Uncharacterized protein. (810 aa)    
Predicted Functional Partners:
psma1
Proteasome subunit alpha type.
   
 0.995
psmb3
Proteasome subunit beta.
   
 0.995
W5N8D2_LEPOC
Proteasome subunit beta 6.
   
 0.995
psmb1
Proteasome subunit beta.
   
 0.995
psmb2
Proteasome subunit beta.
   
 0.994
psma3
Proteasome subunit alpha type.
   
 0.994
psma4
Proteasome subunit alpha type.
   
 0.994
psma5
Proteasome subunit alpha type.
   
 0.993
W5NA30_LEPOC
Proteasome 26S subunit, non-ATPase 8.
   
 0.989
psmc2
Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.
   
 0.985
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.