STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serpine3Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3; Belongs to the serpin family. (420 aa)    
Predicted Functional Partners:
vtn
Vitronectin a.
   
 0.601
HGFAC
HGF activator.
  
 0.598
CCDC157
Coiled-coil domain containing 157.
   
    0.534
agtr1
Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.
    
  0.493
cltrn
Si:dkey-194e6.1.
    
 0.469
ace2
Angiotensin-converting enzyme.
    
 0.469
ace
Angiotensin-converting enzyme.
    
 0.469
atp6ap2
ATPase H+ transporting accessory protein 2.
   
  0.454
W5MF23_LEPOC
Complement component 1, q subcomponent, C chain.
     
 0.446
W5M865_LEPOC
VWFA domain-containing protein.
    
 0.434
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.