STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtpbp10GTP-binding protein 10 (putative). (373 aa)    
Predicted Functional Partners:
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.930
malsu1
Si:zfos-1192g2.3.
  
 
 0.913
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.908
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.902
W5NF35_LEPOC
Mitochondrial ribosomal protein L14.
    
   0.893
mrpl21
Mitochondrial ribosomal protein L21.
  
 
 0.884
ddx28
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
  
 0.880
mrpl32
Uncharacterized protein.
  
 
 0.876
MRPL58
Mitochondrial ribosomal protein L58.
  
 
 0.874
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.871
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.